BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C08LP1|AL429712
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1729 0.0
3x_Contig66 543 e-154
>3x_Contig1530
Length = 6216
Score = 1729 bits (872), Expect = 0.0
Identities = 875/876 (99%)
Strand = Plus / Minus
Query: 1 cacactttcatggtttgtattcacattgaaaatcaaaatcaaggggacttttaccctttt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4788 cacactttcatggtttgtattcacactgaaaatcaaaatcaaggggacttttaccctttt 4729
Query: 61 gttctactggagatttctgttctccatgagtcccccttaggacatctgcgttatcgttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 gttctactggagatttctgttctccatgagtcccccttaggacatctgcgttatcgttta 4669
Query: 121 acagatgtgccgccccagccaaactccccacctgacaatgtcttcaacccggatcagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4668 acagatgtgccgccccagccaaactccccacctgacaatgtcttcaacccggatcagccc 4609
Query: 181 gtataggactttgaatgctagaacgtggaaaatgaattccagctccgcttaattgaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4608 gtataggactttgaatgctagaacgtggaaaatgaattccagctccgcttaattgaataa 4549
Query: 241 gtaaagaaactataaaggtagtggtatttcactggcgccgaagctcccacttatgctaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4548 gtaaagaaactataaaggtagtggtatttcactggcgccgaagctcccacttatgctaca 4489
Query: 301 ccctctatgtctcttcacaatgtcaaactagagtcaagctcaacagggtcttctttcccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4488 ccctctatgtctcttcacaatgtcaaactagagtcaagctcaacagggtcttctttcccc 4429
Query: 361 gctgattctgccaagcccgttcccttggctgtggtttcgctagatagtagatagggacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4428 gctgattctgccaagcccgttcccttggctgtggtttcgctagatagtagatagggacag 4369
Query: 421 tgggaatctcgttaatccattcatgcgcgtcactaattagatgacgaggcatttggctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4368 tgggaatctcgttaatccattcatgcgcgtcactaattagatgacgaggcatttggctac 4309
Query: 481 cttaagagagtcatagttactcccgccgtttacccgcgcttggttgaatttcttcacttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4308 cttaagagagtcatagttactcccgccgtttacccgcgcttggttgaatttcttcacttt 4249
Query: 541 gacattcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccatcgcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4248 gacattcagagcactgggcagaaatcacattgcgtcaacatcactttctgaccatcgcaa 4189
Query: 601 tgctatgttttaattagacagtcagattccccttgtccgtaccagttctaagttgatcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4188 tgctatgttttaattagacagtcagattccccttgtccgtaccagttctaagttgatcgt 4129
Query: 661 taattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaaggcccgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4128 taattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaaggcccgc 4069
Query: 721 aagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgccgcgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4068 aagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgccgcgtc 4009
Query: 781 tgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttacggatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4008 tgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttacggatct 3949
Query: 841 attttgccgacttcccttatctacattattctatca 876
||||||||||||||||||||||||||||||||||||
Sbjct: 3948 attttgccgacttcccttatctacattattctatca 3913
>3x_Contig66
Length = 1023
Score = 543 bits (274), Expect = e-154
Identities = 281/282 (99%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 596 cgcaatgctatgttttaattagacagtcagattccccttg-tccgtaccagttctaagtt 654
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4 cgcaatgctatgttttaattagacagtcagattccccttggtccgtaccagttctaagtt 63
Query: 655 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcgttaattgcagcaagcgacggtctacaagagacctaccaaggccgtctacgacaag 123
Query: 715 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcccgcaagcagtccgtcccaccgagcaagcccagtaagacagtccacaagcatgcccgc 183
Query: 775 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cgcgtctgaccaaggccctcactgcccgatccttagagccaatccttatcccgaagttac 243
Query: 835 ggatctattttgccgacttcccttatctacattattctatca 876
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggatctattttgccgacttcccttatctacattattctatca 285
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4097
Number of Sequences: 1807
Number of extensions: 4097
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)